CDS
| Accession Number | TCMCG006C85046 |
| gbkey | CDS |
| Protein Id | XP_013687290.1 |
| Location | complement(join(5852473..5852643,5852735..5852846,5852917..5852983,5853096..5853136,5853243..5853335,5853421..5853533,5853612..5853731,5854052..5854194,5854263..5854377,5854564..5854668)) |
| Gene | LOC106391227 |
| GeneID | 106391227 |
| Organism | Brassica napus |
Protein
| Length | 359aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013831836.2 |
| Definition | cytoplasmic tRNA 2-thiolation protein 1 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14168
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04122
[VIEW IN KEGG] map04122 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGAAGCAAGCGAAGCAAAGAGCAAGAAACAAGGAGCCTCTCGCCTCTGCTGCTTATGTAACCAGAGACGCCCCGTCCTCAAACGACCCAAAACCCTTCAACAGATATGCAAGGATTGCTTCTACGAGGTCTTTGAGGAGGAGATTCATCAAGTCATTGTTAAGAATGGTTTATTCAAAGCCGGTGAACGTGTTGCTATTGGTGCCTCTGGTGGCAAAGATTCTACAGTACTGGCGTATGTGTTGTCAGAGCTAAACAGACGTCACAGTTACGGGCTAGATCTCTTTCTCTTGTCCATAGATGAAGGGATCACAGGTTACCGTGATGATTCTCTTGAGACCGTTAAACGAAACGAACTCCAATATGGGTTGCCTCTTCAGATACTTTCATACAAAGATCTGTATGGATGGACAATGGACGACATTGTGAAAATGATCGGTCTTAAGAACAATTGCACCTTCTGTGGTGTCTTCCGTAGACAGGCGCTTGATAGAGGAGCTGCGTTGTTGAAAGTAGATAAGCTAGTAACTGGTCATAACGCAGATGATATAGCAGAAACCGTTCTCTTGAACATCTTGCGTGGGGATATCGCTAGATTAAGTCGGTGTACATCGATAACTACAGGTGAAGATGGTCCCATTCCAAGATGTAAACCTTTCAAGTATACATACGAGAAGGAGATTGTCATGTATGCTTATTTCAAGAAGCTGGACTACTTCTCCACCGAATGTATATACTCTCCTAATGCGTATCGTGGCTTCGCCCGTGAGTTCATCAAAGATTTGGAGAGACTAAGGCCAAGGGCGATTCTAGACATCATAAAATCTGGTGAAGATTTTAGAATTGCAACAACTACAAAGATGCCTGAGCAAGGGACTTGCGAGCGGTGCGGTTATATCTCTAGCCAGAAATGGTGTAAAGCTTGTGTTTTGTTGGATGGACTGAACCGTGGTTTGCCTAAGATGGGTATTGGAAGAGCGAGAGGAGGCGTAAATGGTGATCATAAAAAGGAAACAAAGAAACCTGCATCTGCTGCAAGATCTTTAGAGAGCAAACAATGTGGATCTCTTGATTTCTAA |
| Protein: MEASEAKSKKQGASRLCCLCNQRRPVLKRPKTLQQICKDCFYEVFEEEIHQVIVKNGLFKAGERVAIGASGGKDSTVLAYVLSELNRRHSYGLDLFLLSIDEGITGYRDDSLETVKRNELQYGLPLQILSYKDLYGWTMDDIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLDGLNRGLPKMGIGRARGGVNGDHKKETKKPASAARSLESKQCGSLDF |